PANTHER Gene Information

Gene Symbol(s):

Lin28b

Organism:

Mus musculus

View Gene in Tree


Tree	Reduced Tree

Gene Name:

Protein lin-28 homolog B

Gene ID:

MGI:3584032

Protein ID:

Q45KJ6

Persistent Id:

PTN000166461

Alternate Ids:

LN28B(Synonym)	Q3UZC6(AltAccession)
Lin28b(Symbol)	380669(GeneID)
AAH89037(EMBL-CDS)	AK133928(EMBL)
755533126(GI)	ENSMUSG00000063804(Ensembl)
MGI:3584032(MGI)	LN28B_MOUSE(UniProtKB-ID)
Show All

PANTHER Classification

PANTHER Family:	PROTEIN LIN-28 (PTHR46109)
PANTHER Subfamily:	PROTEIN LIN-28 HOMOLOG B (PTHR46109:SF3)
PANTHER GO-slim Molecular Function:	mRNA binding
PANTHER GO-slim Biological Process:	pre-miRNA processing
PANTHER GO-slim Cellular Component:	cytoplasm nucleus
PANTHER protein class:	RNA metabolism protein

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	zinc ion binding, RNA binding, mRNA binding, sequence-specific double-stranded DNA binding
GO BP Complete:	negative regulation of primary miRNA processing, pre-miRNA processing, positive regulation of miRNA catabolic process, RNA 3'-end processing, negative regulation of pre-miRNA processing, RNA destabilization, miRNA catabolic process
GO CC Complete:	nucleus, cytoplasm, cytosol, nucleolus, nucleoplasm

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=32207\|UniProtKB=Q6ZN17	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000018453.6\|UniProtKB=H2QTG7	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000015437.3\|UniProtKB=G3RHE0	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000064609.1\|UniProtKB=A0A5F7ZUK7	Macaca mulatta	LDO
RAT\|RGD=1597432\|UniProtKB=D3ZIK1	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000043973.3\|UniProtKB=F1N777	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005030581.1\|UniProtKB=A0A4X1VED0	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000020994.4\|UniProtKB=A0A3Q2HGN3	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000044308.2\|UniProtKB=A0A337SD19	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845007472.1\|UniProtKB=A0A8I3N5T6	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000018035.4\|UniProtKB=F6ZWF9	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000047568.1\|UniProtKB=A0A6I8P2Y3	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010013340\|UniProtKB=Q45KJ4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000003957.4\|UniProtKB=H9G8A6	Anolis carolinensis	LDO
XENLA\|Gene=lin28b\|UniProtKB=Q8AVK2	Xenopus laevis	O
XENLA\|Gene=lin28b.S\|UniProtKB=A0A1L8G2U8	Xenopus laevis	O
XENLA\|Gene=lin28b.L\|UniProtKB=A0A8J0VB29	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-1218969\|UniProtKB=B4F6I0	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000012891.2\|UniProtKB=A0A3B3HF52	Oryzias latipes	LDO
DANRE\|Gene=lin28b\|UniProtKB=A0A8M9P2F4	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000016539.1\|UniProtKB=W5NIG6	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000024084.1\|UniProtKB=A0A1W3JL17	Ciona intestinalis	O
BRAFL\|Gene=LOC118422462\|UniProtKB=A0A9J7LPZ6	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC587196\|UniProtKB=A0A7M7RFY9	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00003014\|UniProtKB=P92186	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00033626\|UniProtKB=Q61CX7	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00278354\|UniProtKB=A0A2A6CCL6	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0035626\|UniProtKB=Q9VRN5	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP006591\|UniProtKB=Q7Q583	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC014742\|UniProtKB=D6WJ86	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_52316\|UniProtKB=E9GLE5	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW023808\|UniProtKB=B7QH57	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG163427\|UniProtKB=T1EU12	helobdella robusta	O
PUCGT\|EnsemblGenome=PGTG_11520\|UniProtKB=E3KM02	Puccinia graminis	O
PUCGT\|EnsemblGenome=PGTG_14864\|UniProtKB=E3KWI4	Puccinia graminis	O