PANTHER Gene Information

Gene Symbol(s):

Rpf1

Organism:

Mus musculus

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Gene Name:

Ribosome production factor 1

Gene ID:

MGI:1917535

Protein ID:

Q7TND5

Persistent Id:

PTN000506796

Alternate Ids:

148680021(GI)	Q3TBS4(AltAccession)
NP_081608(refSeq)	70285(GeneID)
ENSMUST00000029838(Ensembl_TRS)	BC028802(EMBL)
Rpf1(Symbol)	RPF1(Synonym)
ENSMUSG00000028187(Ensembl)	BAE42233(EMBL-CDS)
MGI:1917535(MGI)	RPF1_MOUSE(UniProtKB-ID)
ENSMUSP00000029838(Ensembl_PRO)
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PANTHER Classification

PANTHER Family:	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 (PTHR22734)
PANTHER Subfamily:	RIBOSOME PRODUCTION FACTOR 1 (PTHR22734:SF3)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	maturation of 5.8S rRNA maturation of LSU-rRNA
PANTHER GO-slim Cellular Component:	nucleolus preribosome, large subunit precursor
PANTHER protein class:	RNA splicing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	RNA binding, rRNA primary transcript binding
GO BP Complete:	maturation of 5.8S rRNA, maturation of LSU-rRNA, rRNA processing
GO CC Complete:	nucleolus, preribosome, large subunit precursor

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=30350\|UniProtKB=Q9H9Y2	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000000901.4\|UniProtKB=H2PZA5	Pan troglodytes	LDO
GORGO\|Ensembl=ENSGGOG00000015862.3\|UniProtKB=G3RIH1	Gorilla gorilla gorilla	LDO
RAT\|RGD=1559755\|UniProtKB=Q5RJS9	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000008118.4\|UniProtKB=F6RR01	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00005029514.1\|UniProtKB=A0A4X1UZQ8	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000019661.3\|UniProtKB=F7CBY3	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000025546.4\|UniProtKB=M3WXF9	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845001641.1\|UniProtKB=A0A8I3MIX2	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000000452.4\|UniProtKB=F6USJ3	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000043157.1\|UniProtKB=A0A6I8NNN6	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010020957.1\|UniProtKB=A0A8V0ZMJ4	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000005753.3\|UniProtKB=H9GAJ4	Anolis carolinensis	LDO
XENLA\|Gene=rpf1\|UniProtKB=Q8AVP1	Xenopus laevis	O
XENLA\|Gene=rpf1.L\|UniProtKB=A0A1L8GLQ8	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-5777492\|UniProtKB=Q28BW3	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000006245.2\|UniProtKB=H2LP70	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-040625-177\|UniProtKB=Q6IQU6	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000010053.1\|UniProtKB=W5MV94	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000007514.3\|UniProtKB=F6UJM5	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118432426\|UniProtKB=A0A9J7MFN6	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC592162\|UniProtKB=A0A7M7PPJ0	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00009711\|UniProtKB=P54073	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00026134\|UniProtKB=A8WSH6	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00114553\|UniProtKB=A0A2A6CFB3	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0032408\|UniProtKB=Q9VKB4	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP009968\|UniProtKB=Q7Q152	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC003427\|UniProtKB=D6WGH3	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_228440\|UniProtKB=E9HDH9	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW018100\|UniProtKB=B7PEH3	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG185141\|UniProtKB=T1FMG1	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g182962\|UniProtKB=A7RX66	Nematostella vectensis	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_38546\|UniProtKB=A9V8M8	Monosiga brevicollis	LDO
YEAST\|SGD=S000001130\|UniProtKB=P38805	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AEL093C\|UniProtKB=Q757V5	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000187860\|UniProtKB=Q5AFD8	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_F21483g\|UniProtKB=Q6C0V2	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_08834\|UniProtKB=Q5AS96	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_5G05930\|UniProtKB=Q4WTS5	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU00404\|UniProtKB=Q7RYQ6	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_00639\|UniProtKB=A7E5R4	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_09145\|UniProtKB=Q0UGG9	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC4F8.04\|UniProtKB=O14180	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_04492\|UniProtKB=B6K6Z1	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNC02820\|UniProtKB=Q5KKJ2	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_00184\|UniProtKB=A0A0D1E768	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_11530\|UniProtKB=E3KM12	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_9487\|UniProtKB=F4NWQ0	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_126010\|UniProtKB=C4LVY6	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0285829\|UniProtKB=Q54MN3	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_29164\|UniProtKB=F0ZD55	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_27_0450\|UniProtKB=E9AD22	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb11.03.0050\|UniProtKB=Q387E5	Trypanosoma brucei	LDO
GIAIC\|EnsemblGenome=GL50803_17112\|UniProtKB=A8BJ58	Giardia intestinalis	LDO
TRIV3\|Gene_ORFName=TVAG_495410\|UniProtKB=A2DVI4	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_0921800\|UniProtKB=C0H549	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00004969001\|UniProtKB=A0BJ79	Paramecium tetraurelia	LDO
PARTE\|EnsemblGenome=GSPATT00003293001\|UniProtKB=A0DZ57	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_31465\|UniProtKB=B8BQI2	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3G8K0_PHYRM\|UniProtKB=H3G8K0	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_04g218850v5\|UniProtKB=A0A2K3DU33	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00109p00137070\|UniProtKB=W1NPM9	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_179G00240\|UniProtKB=A0A0K9PRD4	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma08_g13500\|UniProtKB=A0A804K674	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma08_g30130\|UniProtKB=A0A804KCF3	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma08_g30140\|UniProtKB=A0A804KCF4	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_006305mg\|UniProtKB=K3XWJ7	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3010G027800\|UniProtKB=C5Z3G3	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb356330\|UniProtKB=B4FYG7	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os06g0137500\|UniProtKB=Q0DES6	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g51480v3\|UniProtKB=I1H1S9	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0647360\|UniProtKB=A0A8I7BI68	Hordeum vulgare subsp. vulgare	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.7HG0648330\|UniProtKB=M0XJN6	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS7D02G072700\|UniProtKB=A0A3B6T8W2	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS3B02G302100\|UniProtKB=A0A3B6FPV5	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G375600\|UniProtKB=A0A1D6BZ35	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_000126\|UniProtKB=A0A1U7YU83	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110785857\|UniProtKB=A0A9R0IBC9	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr11g0487581\|UniProtKB=A0A9K3MZR5	Helianthus annuus	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a010059mg\|UniProtKB=A0A022RL80	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_28688\|UniProtKB=A0A2G2YHY7	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400000409\|UniProtKB=M0ZHV3	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc11g066280.2\|UniProtKB=A0A3Q7JNW5	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107817240\|UniProtKB=A0A1S4CBC2	Nicotiana tabacum	O
TOBAC\|Gene=LOC107780918\|UniProtKB=A0A1S3YXV2	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi14g00746\|UniProtKB=E0CU59	Vitis vinifera	O
VITVI\|EnsemblGenome=Vitvi07g01999\|UniProtKB=F6H4J0	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_A02139\|UniProtKB=A0A059DHS7	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00005981001\|UniProtKB=A0A078G028	Brassica napus	O
BRANA\|Gene_ORFName=GSBRNA2T00023288001\|UniProtKB=A0A078J387	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra036325\|UniProtKB=M4F5G9	Brassica campestris	LDO
ARATH\|TAIR=locus=2116992\|UniProtKB=Q9M125	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107937025\|UniProtKB=A0A1U8MES0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107954412\|UniProtKB=A0A1U8P556	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_005003\|UniProtKB=A0A061DTW3	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g016414mg\|UniProtKB=A0A067H6Z9	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_014G108400v3\|UniProtKB=B9I969	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_002G182600v3\|UniProtKB=B9GRT3	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_07G093900\|UniProtKB=A0A2C9VK13	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1341440\|UniProtKB=B9RMY3	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_16G016200\|UniProtKB=I1MK96	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_07G047700\|UniProtKB=I1KHL6	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_8g023820\|UniProtKB=A0A072TYA8	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr12_06250\|UniProtKB=A0A2I4FRK6	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G814330\|UniProtKB=A0A0A0LH42	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_2G203400\|UniProtKB=M5X062	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_185811\|UniProtKB=D8T657	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c1_10040\|UniProtKB=A0A2K1L7M1	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0132s0039\|UniProtKB=A0A2R6W7Y8	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_009470030\|UniProtKB=A0A1Y1IMV5	Klebsormidium nitens	LDO