Home     Browse     Genes     Families and HMMs     Pathways     Ontologies     Tools     Workspace  
  Search Families     Download HMMs  
 
PANTHER Family Information   
Family: ALDO/KETO REDUCTASE (PTHR11732)
Subfamilies: 16
PANTHER Links:
Tree  Multiple Sequence Alignment
Tree  MSA
Abstract:

The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others [PMID:2498333]. All possess a similar structure, with a beta-alpha-beta fold characteristic of nucleotide binding proteins [PMID:2105951]. The fold comprises a parallel beta-8/alpha-8-barrel, which contains a novel NADP-binding motif. The binding site is located in a large, deep, elliptical pocket in the C-terminal end of the beta sheet, the substrate being bound in an extended conformation. The hydrophobic nature of the pocket favours aromatic and apolar substrates over highly polar ones [PMID:1621098].

Binding of the NADPH coenzyme causes a massive conformational change, reorienting a loop, effectively locking the coenzyme in place. This binding is more similar to FAD- than to NAD(P)-binding oxidoreductases [PMID:1447221].

Some proteins of this entry contain a K+ ion channel beta chain regulatory domain; these are reported to have oxidoreductase activity [PMID:10884227].


InterPro Accession: IPR001395
PANTHER Molecular Function: Molecular function unclassified

PANTHER Biological Process: Biological process unclassified

Pathway Categories: No pathway information available
Training Sequences: 403
HMM Length 456
Downloads: HMM (HMMER format)

Genes assigned to this Family
  Total Celera FlyBase NCBI
H. sapiens 49 30 0 19
M. musculus 53 33 0 20
R. norvegicus 43 20 0 23
D. melanogaster 13 0 13 0
About   |   Contact Us   |   System Requirements   |   Privacy Policy   |   Disclaimer
© Copyright 2007 SRI International. All Rights Reserved.